Index

A

aligned_assembly (class in nxrepair)

B

breakContigs_double() (nxrepair.aligned_assembly method)

G

get_anomalies() (nxrepair.aligned_assembly method) get_mapping_anomalies() (nxrepair.aligned_assembly method) get_read_mappings() (nxrepair.aligned_assembly method)

get_read_size_distribution() (nxrepair.aligned_assembly method) get_reads() (nxrepair.aligned_assembly method) get_size_anomalies() (nxrepair.aligned_assembly method)

M

make_tree() (nxrepair.aligned_assembly method)

N

nxrepair (module)